You can use a flat washer under a lock washer with no problem.
The locker washer is to keep tension on the threads of a fastener, thus prevent loosening through vibration.
Occasionally, one needs a flat washer to spread a load or, most frequently in my case, to reduce the size of the hole the bolt or screw passes through. Sometimes a hole may by as large as the OD of the lock washer. Many reasons for this...mostly due to opening the original hole because it was drilled off location.
You get the drift, I'm sure...
Bottom line; no problem using a flat washer under a lock washer.
BTW, if it's a through hole, and you'll be using a nut...put the lock washer under the nut. A blind hole...obviously, the lock washer goes under the bolt or screw head.