Kirk, Is your indoor wood burner a radiant stove or a furnace type somehow hooked to your plenum? What I get from your post is how to effectively move the heat to the extremities of the house using your wood stove's output, is this correct? Air is the least efficient medium for heat transfer but ironically the most common. A chunk of wood has a fixed BTU value, it cannot be multiplied through division. KYErik is correct in that the only waste heat you have to capture is going up the chimney. I have a hybrid heating system that relies on mass for heat retention so I can relate to what you are trying to do.
The goal for most people is to extract the most BTU's out of their fuel source. Easily metered fuel's such as gas and liquid are most commonly applied to forced air systems, i.e., easy thermostat application and just pay the bill. Pellet stoves offer nearly the same convenience but are radiant. Wood boilers are popular because they can keep the mess outside, are easily tied to forced air systems but in this manor are energy hogs to the max. Having the proper thermal storage can increase the overall efficiency of your boiler, an idling boiler is wasting energy. Boilers are perfect for in floor heating but not so perfect for forced air systems.