I did the plastigauge:
#1 .002"
#2 .002"
#3 .0005" (it pretty well smoshed it.. it was slightly wider than the .001" indicator)
.002 is fine. .0005 is not. However, from what you describe, I can't see how it has become so tight, unless the rod is out of round, and you happened to pick the tight spot.
The bearings look ok to me. The coating on top of the copper layer is only about 0.0001, so just pointing to that as a problem, is a problem in itself.