Actually, it sounds to me like the problem is probably the safety on the loader valve. Am I thinking about your plumbing correctly? Does yours go from the resovoir to the pump, to the loader valve to the rear 3PH control valve? If so, here is probably what is happening: The safety relief on the loader valve basically connects the input line to the output line when the pressure on the input line gets too high. When you work a control on the loader valve, you divert the input fluid to a cylinder, pressure builds and the loader moves. At the same time, the return line from the cylinder being worked, exits out thru the valve output line toward the rear valve and resovoir. If you can't build any pressure in the loader control, nothing happens. A safety valve stuck open a little bit allows some of the fluid to bypass the cylinders you are attempting to move with the loader control but still allows you to build pressure. Pressure = force, and flow = speed. so a partially stuck open safety would cause slow, and ultimately weak operation. By working the rear valve, you may be imposing some small pressure spikes in the loader valve, which have re-seated the safety valve for a time.
A mechanics stethescope might help you to positively identify this. Take a listen to the safety relief cartridge on the loader valve while you are trying to work the controls. with the loader working normally, There should be no real noise from the relief unless you run a cylinder to it's end point. When this happens, the safety will open and squeel as fluid at full system pressure is forced past the relief valve seat... If it sounds like it has flow thru it at any other time, it is stuck open.