I cleaned the battery terminals and cable clamps today. To check the connection from the negative cable clamp to chassis I measured the resistance at several different places on the chassis and when I first touch it, it reads about 1 ohm but if I hold it for a couple of seconds it goes down to 0.2 ohms. Is that low enough for a good connection? On the positive cable I checked the resistance between the positive cable clamp and the positive on the alternator and it also read 0.2 ohms after a couple of seconds.
I charged the battery at 2 amps and in the beginning with the charger connected it read 12.6 volts but over time it got up to about 13.5v. When the charger was disconnected the battery read 12.95v and an hour after charging stopped it read 12.9v, 2 hours after charging it read 12.88v. I'll check it one more time later tonight.
I don't have any idea why your VOM reads an ohm and then eventually drops to 0.2. My guess is that has to do with the meter, not the battery cable. Does it do the same thing when you just touch the two voltmeter leads together?
How about when you measure something metallic - like from one end of your tool box to the other?
Anyway, I'm tempted to call the cables and connectors good, because after all, they did get to 0.2 ohms in a reasonable amountof time, and that is about the right resistance.
Same verdict on the battery test. If that battery still reads over 12.6 volts this time tomorrow I'll call it good.
Do't forget to disconnect the glow plugs. You can look at them in the parts book on Messick's site and see what they look like and how connected.
I just checked that parts catalogue at Messick's online, and your L4610 uses an alternator that has the diode rectifier plate and the voltage regulator built right onto the alternator case so either can be replaced. Not all alternators are made that way, but yours is. And it means that just as LittleBill21 said, if you measure DC voltazge from the insulated connector post on the back of your alternator to the frame of the tractor then whether the battery is hooked up or not you should see between 13 and 14 point something volts at a fast idle.
If you see less voltage, then either the alternator windings are bad, one of the diodes is bad, the voltage regulator is no good, or the grounding brush is worn out.
If you saw over 13 volts on the back of the alternator at a fast idle, now put the the battery into the circuit if it wasn't already, and measure from one post of the battery to the other post. You should see the identical voltage.
If not, then the problem has to be in the wiring between the alternator and battery - probably in the key switch.
Aside:
There are many ways to repair an alternator. They are built to be easily repaired. But that's assuming that you are starting with a stock Kubota alternator, and it sounds like your mechanic replaced it with something else.
A stock Kubota alternator brand new costs about $320 retail, and comes with all the right brand new parts. It mounts with two bolts and one wire. Depending on what you measure for voltage, that might be where you end up.
Good Luck,
rScotty