Not exactly. The tool is only for measuring. You set the pitch by making adjustments to your own machine as outlined in your owners manual. All the blades are on the same plane basically since you are pitching them instead of the entire deck. The actual difference from the blade tip in the center to the ground (at the front end) when it is pointing front to rear is almost non existent from the side blades. If you pitched only the center blade and not the side blades, you'd still end up with the same exact scenario, only with less chance of catching anything out of whack. If you try to set the pitch on all three exactly the same, you'll just end up frustrating yourself over nothing. Trust me, if it mattered, I'd do it to mine. I have been setting both pitch and level for a lot of years on a lot of different machines, and have yet to have one not cut great when done. Don't worry that you'll end up with some sort of small trough at the center. You won't.

The side to side should be done first with the two outer blades pointing straight to each side, then do the pitch. The pitch on JD's works best when set to be 3/8" front to rear on the blades themselves, not the deck shell. then when your weight is on it, the pitch will be right at 1/4".