What you're experiencing is normal. When the rear wheels drop into a slight depression, the cutter will cut shorter. When the rear wheels raise over a slight hump, the cutter will cut taller. Only way to avoid this would be to mount at least one outboard guide wheel onto the cutter body. I've thought about doing this, as I have a very heavy duty castor wheel that's adjustable for height and can even be swung up out of the way. However, it would stick out to one side. I'd have to watch in not going too close on that side to trees and such.
Others talked about using an adjustable slide on your top link. My LX4 cutter has this. It doesn't stop the uneven cutting due to the rear tires going over rises or into dips. Think the only way this would even things out would be to adjust the rear of the cutter to cut lower than the front. This generally isn't recommended because it takes a bit more hp because you're cutting the grass (going forward anyway) several times.
Ralph