An excellent way to clean up the female spline is to find a flat file that is slightly thinner than the width of a spline groove. You take a piece of 120 grit aluminum oxide cloth, rip it to an appropriate width and fold it around the edge of the file. Hold the cloth around the file and stroke it up and down the length of each spline groove until they are nice and smooth. I would hit the longitudinal corners of the spline grooves to chamfer them slightly. Use a small flap wheel to polish the "ID" of the female spline socket.
I use the abrasive cloth wrapped around a file edge all the time on shaft keyways at work. Works like a charm every time. The trick is having a nice variety of different sized flat files in my tool box!
Sharp corners are a frequently overlooked culprit to stuck keys and splines. The bottom corners of a keyway are never a perfectly sharp corner as there is always some radius present. Try cramming a sharp cornered key in a slot with radiused corners and you'll have a fight on your hands.