Slid the drive shaft back into place, cleaned up all the mating surfaces, and put the two halves of the tractor back together. I wasn't the easiest thing to do as 4 hydraulic lines, 4 studs, and the drive shaft all had to line up as it went back together. A little fiddling, some prying, etc and I had it all lined up. Put in a few of the bolts and that is where it is so far. I still have to put everything else back together, but at least the main fix is done. Probably will take another 3-4hrs to get everything else back together as I like to clean everything up and torque everything to spec as I go. Might get a chance to work on it tomorrow or monday, I'll give an update once it's back up and running (hopefully without to many leaks, lol)
Here's a pic of it as it sits now: