I would think that any particles would either settle to the bottom or float to the top overnight.
My 5075 Deere’s fuel tank has a drain valve at the bottom. So does its fuel filter assembly (though without looking I’m not sure if it drains fuel from upstream or downstream of filter material. Upstream?). I’ve used these to draw off any suspected water at the bottom.
I wonder if a quick “flush/drain” of a pint/quart/gallon or two in the morning would remove some fuel at the bottom with the higher particle matter?
Maybe not, but all in all, I agree with others who say run it, and keep some extra filters on hand.